BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB009C06SP1|AL426003
(841 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1795 1646 0.0
>3x_Contig1795
Length = 38452
Score = 1646 bits (829), Expect = 0.0
Identities = 838/841 (99%), Gaps = 1/841 (0%)
Strand = Plus / Minus
Query: 2 tgaagcagaagatgatgatgaggaagatgagttcgctgaattccagagtgcaacaccatc 61
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19210 tgaagcagaagatgatgatgaggaagatgagttcgctgaattccagagtgcaacaccatc 19151
Query: 62 cgcctccacaaagaaatcaggcgggttggatgacttgatcttctccaacaacaactcttt 121
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19150 cgcctccacaaagaaatcaggcgggttggatgacttgatcttctccaacaacaactcttt 19091
Query: 122 cgcaacaccgtcgcacacttatgtcccatctgcaacagtaactcctgctattgcagaaac 181
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19090 cgcaacaccgtcgcacacttatgtcccatctgcaacagtaactcctgctattgcagaaac 19031
Query: 182 ctccaaaaattctgatccattcggatccttgttttcatctgcaaagaatgaaccgtttaa 241
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19030 ctccaaaaattctgatccattcggatccttgttttcatctgcaaagaatgaaccgtttaa 18971
Query: 242 ggctgctcccaaacctaaacagcctcaactaaatgccaataccaacaacgcttcaaaaga 301
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18970 ggctgctcccaaacctaaacagcctcaactaaatgccaataccaacaacgcttcaaaaga 18911
Query: 302 tacagatttgttcggcgatttaaagcctgcgcctaaatcccctgctgctccagcaacaaa 361
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18910 tacagatttgttcggcgatttaaagcctgcgcctaaatcccctgctgctccagcaacaaa 18851
Query: 362 taacaaatctgaagaaattgacttgcttagcttctaaaatgttccgtaacgcacacatat 421
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18850 taacaaatctgaagaaattgacttgcttagcttctaaaatgttccgtaacgcacacatat 18791
Query: 422 caacctgtataagtagaacaatgtactcttttcactaggcaacttgctataatgtaagta 481
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18790 caacctgtataagtagaacaatgtactcttttcactaggcaacttgctataatgtaagta 18731
Query: 482 gtcttttaacctttaagaggattcaatcaatcacgtgaccaacaaaggcttttcctgaat 541
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18730 gtcttttaacctttaagaggattcaatcaatcacgtgaccaacaaaggcttttcctgaat 18671
Query: 542 gttaaaggccaacttagatgcgaaa-scgtcgaaggttttagtacaacatttaagtaaga 600
||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 18670 gttaaaggccaacttagatgcgaaagccgtcgaaggttttagtacaacatttaagtaaga 18611
Query: 601 ctctatcgtacataagtgtatgctcatcccttggactattcatttactaaattagatcca 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18610 ctctatcgtacataagtgtatgctcatcccttggactattcatttactaaattagatcca 18551
Query: 661 ttcgtaaggratcagactattgcacgccatttttatcatgatatactcactttggatctt 720
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18550 ttcgtaaggaatcagactattgcacgccatttttatcatgatatactcactttggatctt 18491
Query: 721 tgacaggcattgtatgtgaatcttataattaatccaccatgactagtggtattcacaaag 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18490 tgacaggcattgtatgtgaatcttataattaatccaccatgactagtggtattcacaaag 18431
Query: 781 cttaacccccagtactaacgtcagttatctctttcgagctacattaaggcaactgcatat 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18430 cttaacccccagtactaacgtcagttatctctttcgagctacattaaggcaactgcatat 18371
Query: 841 t 841
|
Sbjct: 18370 t 18370
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6416
Number of Sequences: 1807
Number of extensions: 6416
Number of successful extensions: 74
Number of sequences better than 1.0e-20: 1
length of query: 841
length of database: 10,358,551
effective HSP length: 16
effective length of query: 825
effective length of database: 10,329,639
effective search space: 8521952175
effective search space used: 8521952175
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)